STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25031.1Conserved hypothetical protein. (642 aa)    
Predicted Functional Partners:
EFL25032.1
Putative glycosyl transferase.
 
  
 0.966
EFL25033.1
Glycosyl transferase, group 2.
     
 0.851
EFL25028.1
LigA protein.
 
   
 0.826
EFL25030.1
Putative LigA.
       0.741
EFL29345.1
Hypothetical protein.
 
     0.633
EFL25773.1
Putative secreted protein.
       0.605
EFL23596.1
Conserved hypothetical protein.
       0.602
EFL27994.1
Conserved hypothetical protein.
  
     0.589
EFL25212.1
Conserved hypothetical protein.
  
     0.581
EFL25118.1
Glycosyl transferase.
  
 
 0.559
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.