Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL25033.1Glycosyl transferase, group 2. (166 aa)    
Predicted Functional Partners:
EFL25032.1
Putative glycosyl transferase.
  
 
  0.899
EFL25031.1
Conserved hypothetical protein.
  
  
 0.843
EFL25030.1
Putative LigA.
       0.741
EFL25894.1
Glycosyl transferase.
 
 
 0.647
EFL25118.1
Glycosyl transferase.
 
 
 0.645
EFL25029.1
Hypothetical protein.
       0.524
EFL25027.1
LuxR family DNA-binding response regulator.
       0.523
EFL25028.1
LigA protein.
       0.481
EFL25034.1
Subtilisin-type proteinase.
       0.472
EFL23977.1
IMP dehydrogenase.
 
   
 0.408
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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