Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL25040.1Putative membrane protein. (272 aa)    
Predicted Functional Partners:
EFL25041.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 
 0.991
EFL25671.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 
 0.950
EFL25039.1
Putative ECF sigma factor RpoE1; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.716
EFL20991.1
Putative membrane protein SCJ1.26.
  
     0.713
EFL21496.1
Putative membrane protein.
  
     0.684
EFL21283.1
Putative secreted protein.
 
     0.653
EFL24541.1
Putative membrane protein.
 
     0.641
EFL21014.1
Putative secreted protein.
 
     0.621
EFL20616.1
Putative membrane protein SCJ1.26.
  
     0.617
EFL28501.1
Putative secreted protein.
  
     0.604
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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