STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25040.1Putative membrane protein. (272 aa)    
Predicted Functional Partners:
EFL25041.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 
 0.998
EFL25671.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 
 0.991
EFL25039.1
Putative ECF sigma factor RpoE1; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.787
EFL20991.1
Putative membrane protein SCJ1.26.
  
     0.713
EFL21496.1
Putative membrane protein.
  
     0.684
EFL21283.1
Putative secreted protein.
 
     0.659
EFL24541.1
Putative membrane protein.
 
     0.647
EFL24248.1
Alanine-rich protein.
  
 
 0.630
EFL21014.1
Putative secreted protein.
 
     0.627
EFL20616.1
Putative membrane protein SCJ1.26.
  
     0.617
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.