STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25051.1Putative transcriptional regulator. (205 aa)    
Predicted Functional Partners:
EFL25050.1
Putative mini-circle protein.
      0.879
EFL25053.1
ABC-2 type transporter.
 
     0.823
EFL25048.1
Xre family toxin-antitoxin system, antitoxin component.
  
    0.714
EFL25057.1
Transcriptional activator TipA.
       0.605
EFL21999.1
Putative transcriptional regulator.
  
    0.574
EFL22087.1
Conserved hypothetical protein.
  
     0.570
EFL23603.1
Putative regulatory protein.
  
    0.566
EFL25052.1
Daunorubicin resistance ATP-binding protein DrrA.
  
    0.562
EFL24664.1
Putative DNA-binding protein.
  
    0.523
EFL23576.1
Putative transcriptional regulator.
  
    0.511
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.