Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL25059.1Putative membrane protein. (570 aa)    
Predicted Functional Partners:
EFL25058.1
DedA protein.
       0.741
EFL21787.1
Sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.681
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
       0.645
EFL24617.1
Non-specific serine/threonine protein kinase.
       0.607
EFL24618.1
Non-specific serine/threonine protein kinase.
       0.607
EFL26833.1
Serine/threonine-protein kinase PK-1 (stoPK-1).
       0.607
EFL22874.1
Putative ATP/GTP-binding protein.
  
     0.604
EFL26749.1
Integral membrane protein.
 
     0.586
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.585
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.572
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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