STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25061.1D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. (320 aa)    
Predicted Functional Partners:
EFL25661.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
  
  
 
0.916
EFL25570.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
  
  
 
0.912
EFL23883.1
Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.907
EFL25344.1
Serine-type D-Ala-D-Ala carboxypeptidase.
     
 0.907
EFL25062.1
Conserved hypothetical protein.
  
  
 0.844
EFL26636.1
Beta-lactamase.
  
  
 0.812
EFL21610.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.784
EFL25393.1
D-alanyl-D-alanine carboxypeptidase (DD-peptidase) (DD-carboxypeptidase) (Penicillin-binding protein) (PBP); Belongs to the peptidase S11 family.
     
 0.784
EFL28176.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.784
EFL25063.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.679
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.