STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25071.1Putative lysyl-tRNA synthetase. (610 aa)    
Predicted Functional Partners:
EFL25072.1
Putative membrane protein.
 
   
 0.948
lysS
lysine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.927
EFL25070.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
     
 0.809
EFL25069.1
Conserved hypothetical protein.
       0.755
EFL25484.1
Putative membrane protein.
 
   
 0.716
EFL25067.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase.
       0.699
EFL25068.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.699
EFL25066.1
Conserved hypothetical protein.
       0.684
EFL25077.1
Putative secreted protein.
       0.605
EFL26995.1
P-loop ATPase; Displays ATPase and GTPase activities.
   
    0.453
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.