STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25073.1Putative glycine betaine/L-proline transport ATP binding subunit; Unextendable partial coding region. (386 aa)    
Predicted Functional Partners:
EFL25074.1
Proline/glycine betaine ABC transporter, permease.
 
 0.995
EFL25076.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
 
 0.994
EFL25075.1
Proline/glycine betaine ABC transporter, permease.
 0.991
EFL25549.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
 
 0.990
EFL25551.1
Proline/glycine betaine ABC transporter, permease.
 
 0.989
EFL25550.1
Proline/glycine betaine ABC transporter, permease.
 
 0.983
EFL27409.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
  
 0.768
EFL25332.1
Putative glycine betaine ABC transporter integral membrane protein.
 
  
 0.656
EFL29256.1
Putative sugar ABC transporter, sugar-binding protein.
     
 0.497
EFL25806.1
ABC transporter, permease.
   
 0.475
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.