STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25092.1CopY family transcriptional repressor. (131 aa)    
Predicted Functional Partners:
EFL25093.1
Acetyltransferase, GNAT family protein.
       0.864
EFL27615.1
Integral membrane protein.
 
 
  0.818
EFL28755.1
Integral membrane protein.
 
 
  0.818
EFL21548.1
Putative integral membrane protein.
 
 
  0.809
EFL25091.1
Putative small membrane protein.
       0.796
EFL25094.1
Lsr2 protein.
       0.751
EFL29038.1
CopY family transcriptional repressor.
  
     0.717
EFL29039.1
Putative integral membrane protein.
 
 
  0.717
EFL25090.1
Conserved hypothetical protein.
       0.703
EFL25084.1
Putative lyase.
       0.605
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.