Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL25094.1Lsr2 protein. (111 aa)    
Predicted Functional Partners:
EFL25093.1
Acetyltransferase, GNAT family protein.
       0.740
EFL25092.1
CopY family transcriptional repressor.
       0.725
EFL25091.1
Putative small membrane protein.
       0.679
EFL26470.1
Conserved hypothetical protein.
  
     0.661
EFL25090.1
Conserved hypothetical protein.
       0.638
EFL22859.1
GCN5-related N-acetyltransferase.
  
     0.630
EFL23019.1
Methionine synthase, vitamin-B12 independent.
  
     0.617
EFL23449.1
Putative secreted protein.
  
     0.613
EFL25084.1
Putative lyase.
       0.572
EFL25085.1
Putative NADP oxidoreductase coenzyme F420-dependent family protein.
       0.572
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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