Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL25141.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
EFL25143.1
Putative acetyltransferase.
 
  
  0.834
EFL25142.1
Hypothetical protein.
       0.773
EFL28202.1
Putative calcium binding protein.
  
     0.591
EFL25466.1
Conserved hypothetical protein.
  
    0.579
EFL25138.1
Hypothetical protein.
       0.565
EFL25139.1
Hypothetical protein.
       0.565
EFL25140.1
Hypothetical protein.
       0.565
EFL28121.1
NHL repeat containing protein.
  
     0.533
EFL28201.1
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.519
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.504
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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