STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25164.1Flavin reductase. (191 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
  
 
 0.764
EFL25165.1
Putative GAF domain protein.
     
 0.759
EFL22847.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.736
EFL25166.1
Putative dimeric protein.
       0.693
EFL27601.1
Polyketide synthase; Truncated CDS.
    
 0.670
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
  
 
 0.664
EFL21631.1
Non-ribosomal peptide synthetase, component; Overlaps another CDS with the same product name.
    
  0.636
EFL28780.1
Non-ribosomal peptide synthetase.
    
  0.636
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.629
EFL21767.1
Riboflavin synthase, alpha subunit.
    
  0.586
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.