Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL25165.1Putative GAF domain protein. (625 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
 
 0.999
EFL27138.1
Sensor histidine kinase/response regulator.
  
 0.998
EFL23001.1
Pas:ggdef.
 
 0.988
EFL20670.1
Sensor histidine kinase/response regulator.
 
 0.977
EFL22810.1
Putative regulatory protein; Truncated CDS.
 
 0.966
EFL25240.1
Putative PAS fold protein; Unextendable partial coding region.
 
 
 0.941
EFL21745.1
Sensory box/GGDEF family protein.
  
 0.936
EFL25860.1
Developmental regulator MorA.
  
 0.936
EFL28762.1
Glycosyl transferase, family 2.
  
 0.930
EFL21328.1
Putative PAS fold protein.
 
 0.920
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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