STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25248.1N- superfamily bifunctional DNA primase/polymerase. (258 aa)    
Predicted Functional Partners:
EFL25246.1
Putative integral membrane transport protein; Truncated CDS; unextendable partial coding region.
 
     0.841
EFL25247.1
Sodium ABC transporter ATP-binding protein NatA.
       0.799
EFL25249.1
Putative sporulation associated protein.
 
     0.730
EFL24248.1
Alanine-rich protein.
  
     0.728
EFL22715.1
Conserved hypothetical protein.
  
     0.706
EFL24343.1
Putative membrane protein.
  
     0.706
EFL24645.1
Conserved hypothetical protein.
  
     0.706
EFL24231.1
Conserved hypothetical protein.
  
     0.702
EFL21604.1
Conserved hypothetical protein.
  
     0.689
EFL24637.1
Putative membrane protein; Overlaps another CDS with the same product name.
  
     0.687
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.