STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25249.1Putative sporulation associated protein. (463 aa)    
Predicted Functional Partners:
EFL25248.1
N- superfamily bifunctional DNA primase/polymerase.
 
     0.730
EFL24343.1
Putative membrane protein.
  
     0.676
EFL24645.1
Conserved hypothetical protein.
  
     0.657
EFL24248.1
Alanine-rich protein.
  
     0.650
EFL25475.1
Putative integral membrane protein.
  
     0.648
EFL24990.1
Putative thymidylate kinase.
  
 
  0.641
EFL23359.1
Putative tetratricopeptide repeat protein.
  
  
  0.629
EFL26159.1
Putative membrane protein.
  
    0.624
EFL22874.1
Putative ATP/GTP-binding protein.
  
     0.623
EFL27131.1
Conserved hypothetical protein.
  
     0.592
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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