STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25261.1Putative secreted protein. (411 aa)    
Predicted Functional Partners:
EFL25259.1
Putative regulatory protein.
       0.707
EFL22029.1
Chitinase.
     
 0.594
EFL26282.1
Glycosyl hydrolase family 10.
    
 0.536
EFL26727.1
Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase).
   
 
 0.531
EFL25260.1
Prolyl aminopeptidase.
       0.521
EFL29161.1
Putative terpene synthase family, metal binding domain protein.
  
     0.521
EFL22109.1
LigA protein.
  
  
  0.489
EFL27782.1
Putative collagen alpha-1(I) chain (Alpha-1 type I collagen).
  
     0.487
EFL28844.1
Ser/Thr protein phosphatase; Truncated CDS.
 
     0.487
EFL23135.1
Polysaccharide deacetylase.
    
 0.481
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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