STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25278.1Putative two-component system sensor kinase. (352 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.997
EFL26775.1
Transcription regulator.
 
 
 0.976
EFL25279.1
Two-component system response regulator.
 
 0.968
EFL27138.1
Sensor histidine kinase/response regulator.
  
 0.961
EFL25275.1
PspC domain protein.
 
    0.855
EFL24727.1
Putative membrane protein.
  
    0.854
EFL23528.1
Conserved hypothetical protein.
 
    0.847
EFL25750.1
Conserved hypothetical protein.
 
    0.822
EFL24807.1
Putative two-component system sensor kinase/response regulator, bifunctional protein.
   
 0.791
EFL23305.1
Conserved hypothetical protein.
 
  
 0.743
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.