STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25280.1LigA protein. (262 aa)    
Predicted Functional Partners:
EFL22988.1
Proline dehydrogenase.
   
 0.946
EFL28522.1
Proline racemase; Belongs to the proline racemase family.
 
  
 0.914
EFL22987.1
1-pyrroline-5-carboxylate dehydrogenase.
   
 
 0.891
EFL20461.1
Prolyl aminopeptidase; Belongs to the peptidase S33 family.
    
  0.889
EFL28523.1
Ornithine cyclodeaminase/mu-crystallin; Truncated CDS.
   
 
 0.807
EFL25282.1
Carboxylesterase.
       0.789
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
  
 
 0.743
EFL20516.1
Proline racemase A (TcPRACA) (TcPA45-A)(rTcPA45); Belongs to the proline racemase family.
 
  
 0.732
EFL21466.1
Putative hydrolase.
    
  0.695
EFL25695.1
Translation initiation factor IF-2.
    
  0.695
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.