STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25291.1Isochorismatase. (184 aa)    
Predicted Functional Partners:
EFL22260.1
Isochorismatase.
  
  
 0.772
EFL28570.1
Isochorismatase.
  
  
  0.735
EFL21438.1
Hydantoinase/oxoprolinase.
    
  0.613
EFL21439.1
Hydantoinase/oxoprolinase; Truncated CDS.
    
  0.613
EFL25290.1
GNAT family acetyltransferase.
       0.562
EFL24810.1
Putative isochorismatase.
  
     0.557
EFL25854.1
Decarboxylase.
    
 0.523
EFL25087.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
   
 0.501
EFL24003.1
YjeF family protein.
   
    0.482
EFL20608.1
4-amino-4-deoxychorismate synthase, component I.
    
 0.476
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.