STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25308.1Putative lipase. (280 aa)    
Predicted Functional Partners:
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.886
EFL24168.1
Triacylglycerol lipase.
   
 
 0.799
EFL21630.1
Non-ribosomal peptide synthetase.
    
  0.787
EFL27601.1
Polyketide synthase; Truncated CDS.
    
 0.783
EFL24432.1
Myosin heavy chain IB (Myosin heavy chain IL).
     
 0.727
EFL25032.1
Putative glycosyl transferase.
   
 
  0.714
EFL27414.1
Alpha/beta hydrolase.
  
  
 0.710
EFL28177.1
Linear gramicidin synthetase LgrC.
    
 0.697
EFL28178.1
Non-ribosomal peptide synthetase; Unextendable partial coding region.
    
 0.697
EFL28179.1
Putative phosphopantetheine attachment site; Unextendable partial coding region.
    
 0.697
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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