Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL25311.1Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. (681 aa)    
Predicted Functional Partners:
EFL25312.1
Von Willebrand factor, type A.
 
   
 0.982
EFL25309.1
Conserved hypothetical protein.
 
     0.899
EFL25310.1
Putative ATPase family associated with various cellular activities (AAA).
 
  
 0.860
EFL21272.1
Putative ATPase family associated with various cellular activities (AAA).
 
  
 0.853
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.812
EFL25313.1
Conserved hypothetical protein.
       0.767
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
   
 
  0.703
sucC
succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
     
 0.614
EFL21273.1
Conserved hypothetical protein.
 
     0.612
EFL26780.1
HesB/YadR/YfhF family protein; Belongs to the HesB/IscA family.
    
 
 0.601
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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