Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL25312.1Von Willebrand factor, type A. (411 aa)    
Predicted Functional Partners:
EFL25311.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
 
   
 0.982
EFL25309.1
Conserved hypothetical protein.
 
     0.899
EFL25310.1
Putative ATPase family associated with various cellular activities (AAA).
 
  
 0.866
EFL21272.1
Putative ATPase family associated with various cellular activities (AAA).
 
  
 0.864
EFL25313.1
Conserved hypothetical protein.
       0.786
EFL23782.1
Putative iron-sulfur oxidoreductase.
     
  0.630
EFL24641.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
     
  0.630
EFL26615.1
Oxidoreductase FAD-binding domain/oxidoreductase NAD-binding domain/2Fe-2S iron-sulfur cluster binding domain protein.
     
  0.630
EFL28077.1
Putative iron-sulfur oxidoreductase.
     
  0.630
EFL28297.1
Vanillate O-demethylase oxidoreductase.
     
  0.630
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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