STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25328.1Serine/arginine repetitive matrix protein 2. (268 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.804
EFL25325.1
Conserved hypothetical protein.
   
   0.732
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.707
EFL21383.1
Forkhead-associated.
    
 
 0.690
EFL26878.1
Putative membrane protein.
  
     0.657
EFL21604.1
Conserved hypothetical protein.
  
     0.656
EFL24767.1
Putative integral membrane protein.
  
     0.653
EFL25877.1
Putative secreted protein.
  
     0.642
EFL22315.1
PAS domain protein.
  
  
  0.631
EFL21109.1
Conserved hypothetical protein.
  
 
   0.626
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.