Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL25330.1Choline dehydrogenase. (528 aa)    
Predicted Functional Partners:
EFL25331.1
Glycine betaine/L-proline ABC transporter, ATP-binding protein.
     
 0.792
EFL25329.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.704
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
     
  0.664
EFL20517.1
Aldehyde dehydrogenase (NAD) family protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.652
EFL22886.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.635
EFL25333.1
Putative glycine betaine-binding lipoprotein.
 
   
 0.621
EFL25332.1
Putative glycine betaine ABC transporter integral membrane protein.
 
   
 0.594
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
  0.587
EFL23032.1
Putative glycine-sarcosine methyltransferase.
     
  0.587
EFL25580.1
Phospholipase C.
     
  0.587
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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