STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25331.1Glycine betaine/L-proline ABC transporter, ATP-binding protein. (364 aa)    
Predicted Functional Partners:
EFL25332.1
Putative glycine betaine ABC transporter integral membrane protein.
 0.999
EFL25333.1
Putative glycine betaine-binding lipoprotein.
 
 0.999
EFL27409.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
 0.999
EFL25330.1
Choline dehydrogenase.
     
 0.790
EFL25551.1
Proline/glycine betaine ABC transporter, permease.
 
 
 0.767
EFL25074.1
Proline/glycine betaine ABC transporter, permease.
 
 
 0.761
EFL25075.1
Proline/glycine betaine ABC transporter, permease.
 
 0.760
EFL25550.1
Proline/glycine betaine ABC transporter, permease.
 
 
 0.730
EFL25076.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
 
 
 0.560
EFL25549.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
 
 
 0.500
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.