STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25332.1Putative glycine betaine ABC transporter integral membrane protein. (644 aa)    
Predicted Functional Partners:
EFL25331.1
Glycine betaine/L-proline ABC transporter, ATP-binding protein.
 0.999
EFL25333.1
Putative glycine betaine-binding lipoprotein.
 
 
 0.999
EFL27408.1
Glycine betaine/L-proline ABC transporter, ATP-binding protein.
 0.998
EFL27409.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
 
 
0.987
EFL25552.1
ABC-type proline/glycine betaine transport system, ATPase component.
 
  
 0.657
EFL25073.1
Putative glycine betaine/L-proline transport ATP binding subunit; Unextendable partial coding region.
 
  
 0.656
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
       0.642
EFL25076.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
  
  
 0.634
EFL25330.1
Choline dehydrogenase.
 
  
 0.591
EFL25549.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
  
  
 0.538
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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