Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL25333.1Putative glycine betaine-binding lipoprotein. (329 aa)    
Predicted Functional Partners:
EFL25332.1
Putative glycine betaine ABC transporter integral membrane protein.
 
 
 0.999
EFL25331.1
Glycine betaine/L-proline ABC transporter, ATP-binding protein.
 
 0.996
EFL27408.1
Glycine betaine/L-proline ABC transporter, ATP-binding protein.
 
 0.989
EFL27409.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
 
 
0.986
EFL22809.1
Sensor histidine kinase/response regulator.
     
 0.751
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
     
 0.626
EFL27138.1
Sensor histidine kinase/response regulator.
     
 0.623
EFL25330.1
Choline dehydrogenase.
 
   
 0.621
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.522
EFL23733.1
Cobalt ABC transporter, permease CbiQ.
  
  
  0.517
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.