STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25333.1Putative glycine betaine-binding lipoprotein. (329 aa)    
Predicted Functional Partners:
EFL25331.1
Glycine betaine/L-proline ABC transporter, ATP-binding protein.
 
 0.999
EFL25332.1
Putative glycine betaine ABC transporter integral membrane protein.
 
 
 0.999
EFL27408.1
Glycine betaine/L-proline ABC transporter, ATP-binding protein.
 
 0.997
EFL27409.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
 
 
0.991
EFL22809.1
Sensor histidine kinase/response regulator.
     
 0.693
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
       0.653
EFL25330.1
Choline dehydrogenase.
 
   
 0.625
EFL23733.1
Cobalt ABC transporter, permease CbiQ.
  
  
  0.517
EFL20435.1
Sarcosine oxidase gamma subunit.
 
  
 0.508
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.480
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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