STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL27378.1Putative ABC-type dipeptide/oligopeptide transport system. (534 aa)    
Predicted Functional Partners:
EFL28703.1
Putative transport system permease protein.
 
 0.849
EFL27425.1
Putative transport system permease protein.
 
 0.846
EFL28366.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein.
 
 0.813
EFL28702.1
Putative solute-binding lipoprotein.
  
  
  0.808
EFL23492.1
Putative extracellular solute-binding dependent transport lipoprotein.
     
  0.807
EFL28050.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.806
EFL29172.1
Peptide/opine/nickel uptake family ABC transporter, permease.
 
  0.771
EFL20537.1
Extracellular solute-binding protein, family 5.
  
  
 
0.770
EFL23479.1
Peptide ABC transporter, permease.
 
  0.767
EFL23585.1
Glutathione ABC transporter, permease.
 
  0.765
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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