STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL27439.1Permease. (359 aa)    
Predicted Functional Partners:
EFL27440.1
Putative membrane protein.
 
  
 0.972
EFL28334.1
Putative membrane protein.
 
  
 0.880
EFL27434.1
Conserved hypothetical protein.
 
     0.615
EFL24005.1
Putative nucleoside-diphosphate-sugar epimerase.
   
    0.580
EFL26820.1
NAD-dependent epimerase/dehydratase.
   
    0.580
EFL27647.1
Conserved hypothetical protein.
   
    0.580
EFL27438.1
Ferric uptake regulation protein; Belongs to the Fur family.
       0.520
EFL27436.1
Cobalamin synthesis protein/P47K family protein.
  
    0.509
EFL27433.1
ArsR family transcriptional regulator.
     
 0.505
EFL20954.1
Putative copper oxidase.
  
  
 0.500
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (28%) [HD]