Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL20954.1 | EFL27439.1 | SSOG_00666 | SSOG_07153 | Putative copper oxidase. | Permease. | 0.500 |
EFL24005.1 | EFL27439.1 | SSOG_03719 | SSOG_07153 | Putative nucleoside-diphosphate-sugar epimerase. | Permease. | 0.580 |
EFL26820.1 | EFL27439.1 | SSOG_06534 | SSOG_07153 | NAD-dependent epimerase/dehydratase. | Permease. | 0.580 |
EFL27433.1 | EFL27434.1 | SSOG_07147 | SSOG_07148 | ArsR family transcriptional regulator. | Conserved hypothetical protein. | 0.845 |
EFL27433.1 | EFL27436.1 | SSOG_07147 | SSOG_07150 | ArsR family transcriptional regulator. | Cobalamin synthesis protein/P47K family protein. | 0.848 |
EFL27433.1 | EFL27438.1 | SSOG_07147 | SSOG_07152 | ArsR family transcriptional regulator. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.875 |
EFL27433.1 | EFL27439.1 | SSOG_07147 | SSOG_07153 | ArsR family transcriptional regulator. | Permease. | 0.505 |
EFL27433.1 | EFL27440.1 | SSOG_07147 | SSOG_07154 | ArsR family transcriptional regulator. | Putative membrane protein. | 0.484 |
EFL27434.1 | EFL27433.1 | SSOG_07148 | SSOG_07147 | Conserved hypothetical protein. | ArsR family transcriptional regulator. | 0.845 |
EFL27434.1 | EFL27436.1 | SSOG_07148 | SSOG_07150 | Conserved hypothetical protein. | Cobalamin synthesis protein/P47K family protein. | 0.792 |
EFL27434.1 | EFL27438.1 | SSOG_07148 | SSOG_07152 | Conserved hypothetical protein. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.789 |
EFL27434.1 | EFL27439.1 | SSOG_07148 | SSOG_07153 | Conserved hypothetical protein. | Permease. | 0.615 |
EFL27434.1 | EFL27440.1 | SSOG_07148 | SSOG_07154 | Conserved hypothetical protein. | Putative membrane protein. | 0.599 |
EFL27436.1 | EFL27433.1 | SSOG_07150 | SSOG_07147 | Cobalamin synthesis protein/P47K family protein. | ArsR family transcriptional regulator. | 0.848 |
EFL27436.1 | EFL27434.1 | SSOG_07150 | SSOG_07148 | Cobalamin synthesis protein/P47K family protein. | Conserved hypothetical protein. | 0.792 |
EFL27436.1 | EFL27438.1 | SSOG_07150 | SSOG_07152 | Cobalamin synthesis protein/P47K family protein. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.813 |
EFL27436.1 | EFL27439.1 | SSOG_07150 | SSOG_07153 | Cobalamin synthesis protein/P47K family protein. | Permease. | 0.509 |
EFL27436.1 | EFL27440.1 | SSOG_07150 | SSOG_07154 | Cobalamin synthesis protein/P47K family protein. | Putative membrane protein. | 0.503 |
EFL27438.1 | EFL27433.1 | SSOG_07152 | SSOG_07147 | Ferric uptake regulation protein; Belongs to the Fur family. | ArsR family transcriptional regulator. | 0.875 |
EFL27438.1 | EFL27434.1 | SSOG_07152 | SSOG_07148 | Ferric uptake regulation protein; Belongs to the Fur family. | Conserved hypothetical protein. | 0.789 |
page 1 of 2