STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL27633.1IS4 family transposase; Unextendable partial coding region. (256 aa)    
Predicted Functional Partners:
EFL27632.1
Alpha/beta hydrolase.
       0.701
EFL23024.1
Putative abortive infection protein.
  
  
 0.690
EFL21960.1
Conserved hypothetical protein.
 
    0.674
EFL20340.1
Putative integral membrane protein.
  
  
 0.666
EFL24480.1
DNA modification methyltransferase-related protein.
  
  
 0.666
EFL25874.1
Conserved hypothetical protein.
  
    0.614
EFL26009.1
IolB protein.
   
    0.602
EFL27726.1
IS4 family transposase; Unextendable partial coding region.
  
     0.587
EFL22559.1
Putative transposase for insertion sequence element.
  
     0.534
EFL27689.1
Putative transposase for insertion sequence element; Unextendable partial coding region.
  
     0.517
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.