Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL21501.1 | EFL23614.1 | SSOG_01213 | SSOG_03328 | Pyridoxal-phosphate dependent enzyme. | Cystathionine gamma-synthase. | 0.968 |
EFL21501.1 | EFL24093.1 | SSOG_01213 | SSOG_03807 | Pyridoxal-phosphate dependent enzyme. | Aspartate transaminase. | 0.889 |
EFL21501.1 | EFL24725.1 | SSOG_01213 | SSOG_04439 | Pyridoxal-phosphate dependent enzyme. | Cys/Met metabolism PLP-dependent enzyme family protein. | 0.964 |
EFL21501.1 | EFL25531.1 | SSOG_01213 | SSOG_05245 | Pyridoxal-phosphate dependent enzyme. | Cystathionine beta-synthase. | 0.900 |
EFL21501.1 | EFL27376.1 | SSOG_01213 | SSOG_07090 | Pyridoxal-phosphate dependent enzyme. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.927 |
EFL21501.1 | EFL28082.1 | SSOG_01213 | SSOG_07796 | Pyridoxal-phosphate dependent enzyme. | Putative aminotransferase B. | 0.812 |
EFL21501.1 | egtA | SSOG_01213 | SSOG_08653 | Pyridoxal-phosphate dependent enzyme. | Glutamate-cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low- molecular thiol compound ergothioneine. | 0.906 |
EFL23245.1 | EFL23614.1 | SSOG_02959 | SSOG_03328 | Homoserine dehydrogenase. | Cystathionine gamma-synthase. | 0.940 |
EFL23245.1 | EFL24093.1 | SSOG_02959 | SSOG_03807 | Homoserine dehydrogenase. | Aspartate transaminase. | 0.471 |
EFL23245.1 | EFL24725.1 | SSOG_02959 | SSOG_04439 | Homoserine dehydrogenase. | Cys/Met metabolism PLP-dependent enzyme family protein. | 0.940 |
EFL23245.1 | EFL25531.1 | SSOG_02959 | SSOG_05245 | Homoserine dehydrogenase. | Cystathionine beta-synthase. | 0.936 |
EFL23245.1 | EFL27376.1 | SSOG_02959 | SSOG_07090 | Homoserine dehydrogenase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.981 |
EFL23245.1 | EFL28082.1 | SSOG_02959 | SSOG_07796 | Homoserine dehydrogenase. | Putative aminotransferase B. | 0.835 |
EFL23245.1 | egtA | SSOG_02959 | SSOG_08653 | Homoserine dehydrogenase. | Glutamate-cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low- molecular thiol compound ergothioneine. | 0.463 |
EFL23245.1 | thrB | SSOG_02959 | SSOG_02957 | Homoserine dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
EFL23614.1 | EFL21501.1 | SSOG_03328 | SSOG_01213 | Cystathionine gamma-synthase. | Pyridoxal-phosphate dependent enzyme. | 0.968 |
EFL23614.1 | EFL23245.1 | SSOG_03328 | SSOG_02959 | Cystathionine gamma-synthase. | Homoserine dehydrogenase. | 0.940 |
EFL23614.1 | EFL24093.1 | SSOG_03328 | SSOG_03807 | Cystathionine gamma-synthase. | Aspartate transaminase. | 0.803 |
EFL23614.1 | EFL24725.1 | SSOG_03328 | SSOG_04439 | Cystathionine gamma-synthase. | Cys/Met metabolism PLP-dependent enzyme family protein. | 0.909 |
EFL23614.1 | EFL25531.1 | SSOG_03328 | SSOG_05245 | Cystathionine gamma-synthase. | Cystathionine beta-synthase. | 0.997 |
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