STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL28849.1GntR family transcriptional regulator. (245 aa)    
Predicted Functional Partners:
EFL26764.1
Regulatory protein GntR, HTH.
  
     0.766
EFL24425.1
Putative GntR-family transcriptional regulator.
  
     0.762
EFL28906.1
GntR family transcriptional regulator.
  
     0.762
EFL26456.1
GntR family transcriptional regulator.
  
     0.757
EFL27639.1
GntR regulatory protein.
  
     0.724
EFL22748.1
Sporulation transcription factor, WhiH.
  
  
 0.715
EFL20514.1
Putative transcriptional regulator.
  
     0.704
EFL26418.1
GntR family transcriptional regulator.
  
  
 0.704
EFL25775.1
Transcriptional regulator, GntR-family.
  
  
 0.666
EFL28847.1
D-mannonate oxidoreductase (Fructuronate reductase); Belongs to the mannitol dehydrogenase family.
   
 0.662
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.