STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL28967.1Putative ABC transporter, ATP-binding protein. (593 aa)    
Predicted Functional Partners:
EFL28968.1
Putative ABC transporter transmembrane subunit.
    
0.854
EFL23898.1
Putative tetratricopeptide repeat protein.
   
 0.754
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.726
EFL20777.1
Polyketide synthase.
   
 0.713
EFL28210.1
Erythronolide synthase, modules 5 and 6 (ORF 3) (6-deoxyerythronolide B synthase III) (DEBS 3).
   
 0.713
EFL20373.1
Putative type I polyketide synthase WcbR.
   
 0.687
EFL20786.1
Polyketide synthase type I.
   
 0.683
EFL28164.1
Polyketide synthase type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.683
EFL28419.1
ABC transporter, transmembrane region.
  
  0.683
EFL28727.1
Type I polyketide synthase AVES 1.
   
 0.683
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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