STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL29259.1Major facilitator family transporter. (420 aa)    
Predicted Functional Partners:
EFL29258.1
3-oxoacyl-acyl carrier protein reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.727
EFL29260.1
TetR family regulatory protein.
     
 0.635
EFL23599.1
Putative transmembrane efflux protein (MFS).
  
     0.463
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.451
EFL25961.1
Purine ribonucleoside efflux pump NepI.
  
     0.435
EFL25184.1
Putative transmembrane efflux protein (MFS).
  
     0.431
EFL29261.1
Putative transcriptional regulator, AraC family.
       0.426
EFL23265.1
Major facilitator family transporter.
  
     0.417
EFL26829.1
Phenolic acid decarboxylase (PAD).
  
     0.404
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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