STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB83653.1TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E; KEGG: aoe:Clos_2107 cyanophycinase; Belongs to the peptidase S51 family. (269 aa)    
Predicted Functional Partners:
ACB83654.1
TIGRFAM: cyanophycin synthetase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; RimK domain protein ATP-grasp; KEGG: tte:TTE2785 UDP-N-acetylmuramyl tripeptide synthase; Belongs to the MurCDEF family.
 
   
 0.975
ispE
4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.613
ACB83656.1
KEGG: pth:PTH_0098 hypothetical protein.
       0.575
ACB83652.1
PFAM: Quinolinate phosphoribosyl transferase; Nicotinate phosphoribosyltransferase-like; KEGG: mta:Moth_1836 nicotinate phosphoribosyltransferase.
       0.527
ACB83657.1
Purine operon repressor, PurR; TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; KEGG: bsu:BSU00470 purine operon repressor.
       0.522
ACB83651.1
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tte:TTE0925 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
       0.438
ACB83658.1
PFAM: SpoVG family protein; KEGG: ssp:SSP2258 regulatory protein SpoVG; Belongs to the SpoVG family.
       0.420
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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