Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACB83665.1 | ACB83667.1 | Nther_0066 | Nther_0068 | KEGG: amt:Amet_0159 hypothetical protein. | TIGRFAM: transcriptional regulator, AbrB family; stage V sporulation protein T; PFAM: GAF domain protein; SpoVT/AbrB domain protein; KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression. | 0.402 |
| ACB83665.1 | mfd | Nther_0066 | Nther_0067 | KEGG: amt:Amet_0159 hypothetical protein. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.531 |
| ACB83665.1 | mntP | Nther_0066 | Nther_0065 | KEGG: amt:Amet_0159 hypothetical protein. | Protein of unknown function DUF204; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.498 |
| ACB83667.1 | ACB83665.1 | Nther_0068 | Nther_0066 | TIGRFAM: transcriptional regulator, AbrB family; stage V sporulation protein T; PFAM: GAF domain protein; SpoVT/AbrB domain protein; KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression. | KEGG: amt:Amet_0159 hypothetical protein. | 0.402 |
| ACB83667.1 | mfd | Nther_0068 | Nther_0067 | TIGRFAM: transcriptional regulator, AbrB family; stage V sporulation protein T; PFAM: GAF domain protein; SpoVT/AbrB domain protein; KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.677 |
| mfd | ACB83665.1 | Nther_0067 | Nther_0066 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | KEGG: amt:Amet_0159 hypothetical protein. | 0.531 |
| mfd | ACB83667.1 | Nther_0067 | Nther_0068 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | TIGRFAM: transcriptional regulator, AbrB family; stage V sporulation protein T; PFAM: GAF domain protein; SpoVT/AbrB domain protein; KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression. | 0.677 |
| mntP | ACB83665.1 | Nther_0065 | Nther_0066 | Protein of unknown function DUF204; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | KEGG: amt:Amet_0159 hypothetical protein. | 0.498 |