STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB83690.1PFAM: DRTGG domain protein; KEGG: tte:TTE0885 hypothetical protein. (130 aa)    
Predicted Functional Partners:
ACB83691.1
PFAM: ATP-binding region ATPase domain protein; KEGG: tte:TTE0886 anti-sigma regulatory factor (Ser/Thr protein kinase).
   
 0.994
ACB83692.1
Fe-S cluster domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: tte:TTE0887 ferredoxin 2.
 
   
 0.930
ACB83693.1
HPr kinase; KEGG: amt:Amet_2277 HPr kinase.
 
  
 0.906
ACB83694.1
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cth:Cthe_0337 PHP-like protein.
 
   
 0.903
ACB83696.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: amt:Amet_2279 histidine kinase.
 
   
 0.883
ACB83697.1
KEGG: fno:Fnod_0994 ferredoxin-like protein.
 
   
 0.882
ACB83689.1
PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG: drm:Dred_0663 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase.
       0.625
ACB83698.1
NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit.
       0.480
ACB83695.1
TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit.
     
 0.434
ACB84423.1
Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; KEGG: amt:Amet_4066 stage II sporulation E family protein.
 
     0.419
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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