STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84319.1KEGG: amt:Amet_4149 hypothetical protein. (344 aa)    
Predicted Functional Partners:
ACB85952.1
KEGG: aoe:Clos_2272 conserved hypothetical protein.
  
     0.679
ACB84030.1
PFAM: polysaccharide deacetylase; KEGG: amt:Amet_1614 polysaccharide deacetylase.
  
    0.655
ACB86459.1
KEGG: pth:PTH_2889 hypothetical protein.
  
     0.607
ACB84318.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KWG Leptospira repeat protein; copper amine oxidase domain protein; KEGG: amt:Amet_1855 KWG Leptospira repeat protein.
       0.588
ACB86447.1
KEGG: amt:Amet_4754 hypothetical protein.
  
     0.580
ACB85803.1
KEGG: amt:Amet_0726 hypothetical protein.
  
     0.573
ACB85910.1
PFAM: membrane-bound metal-dependent hydrolase; KEGG: dsy:DSY1801 hypothetical protein.
  
     0.563
ACB85361.1
KEGG: ckl:CKL_3140 hypothetical protein.
  
     0.544
ACB84252.1
PFAM: peptidase M14 carboxypeptidase A; KEGG: cbh:CLC_1409 zinc carboxypeptidase family protein.
  
     0.530
ACB84317.1
PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cth:Cthe_1461 FAD dependent oxidoreductase.
 
     0.526
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.