STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84386.1PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein. (88 aa)    
Predicted Functional Partners:
ACB84385.1
Hypothetical protein.
       0.642
ACB84384.1
PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase.
       0.413
ACB84382.1
PFAM: N-6 DNA methylase; KEGG: mba:Mbar_A1016 type I restriction-modification system methyltransferase subunit.
       0.406
ACB84383.1
PFAM: restriction modification system DNA specificity domain; KEGG: gka:GK2905 type I restriction-modification system specificity determinant.
       0.406
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.