STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84425.1ATP-dependent nuclease subunit B-like protein; KEGG: sru:SRU_1807 hypothetical protein. (1048 aa)    
Predicted Functional Partners:
ACB84426.1
UvrD/REP helicase; ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
 
 0.991
addA
Recombination helicase AddA; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily.
 
 
 0.882
ACB84395.1
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response); Belongs to the helicase family. UvrD subfamily.
  
 
 0.799
ACB84427.1
KEGG: amt:Amet_1870 hypothetical protein.
       0.628
ACB86263.1
KEGG: tpd:Teth39_1959 hypothetical protein.
  
     0.569
ACB86182.1
KEGG: amt:Amet_0367 S-layer domain-like protein.
 
     0.499
ACB84429.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
    0.405
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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