STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84459.1KEGG: tte:TTE2377 hypothetical protein. (51 aa)    
Predicted Functional Partners:
ACB84460.1
TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: dsy:DSY4477 hypothetical protein.
       0.693
ACB84458.1
TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: pth:PTH_1839 hypothetical membrane protein.
       0.634
ACB84461.1
PFAM: GerA spore germination protein; KEGG: dsy:DSY4476 hypothetical protein.
       0.542
ACB84457.1
PFAM: SNARE associated Golgi protein; KEGG: cpr:CPR_1585 uncharacterized conserved protein, YdjX/UPF0043 family.
       0.428
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.