STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84463.1KEGG: cpr:CPR_1376 hypothetical protein. (186 aa)    
Predicted Functional Partners:
ACB84464.1
KEGG: hma:rrnAC1868 hypothetical protein.
       0.531
ACB84021.1
PFAM: protein of unknown function DUF161; KEGG: amt:Amet_1088 protein of unknown function DUF161.
  
     0.526
ACB84462.1
Hypothetical protein.
       0.497
ACB84465.1
PFAM: flavodoxin/nitric oxide synthase; KEGG: mtp:Mthe_1261 flavodoxin/nitric oxide synthase.
  
    0.493
ACB84533.1
PFAM: CBS domain containing protein; KEGG: cbf:CLI_1207 CBS domain protein.
  
     0.487
ACB85135.1
PFAM: nitroreductase; KEGG: amt:Amet_2826 nitroreductase.
  
     0.486
ACB85364.1
KEGG: amt:Amet_0772 hypothetical protein.
  
     0.455
ACB86008.1
KEGG: amt:Amet_0938 diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region.
  
     0.429
ACB85442.1
KEGG: ssv:SSU98_2060 hypothetical protein.
  
     0.410
ACB85677.1
Diguanylate cyclase and metal dependent phosphohydrolase; KEGG: swo:Swol_2483 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region.
  
     0.409
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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