STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84751.1PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tme:Tmel_0907 pyridoxal-5'-phosphate-dependent enzyme, beta subunit. (473 aa)    
Predicted Functional Partners:
ACB84749.1
PFAM: dihydrodipicolinate reductase; KEGG: tpd:Teth39_1040 dihydrodipicolinate reductase.
 
     0.948
ACB84750.1
KEGG: tme:Tmel_0906 hypothetical protein.
 
     0.948
ACB84752.1
KEGG: aoe:Clos_1696 D-ornithine aminomutase S component.
 
     0.948
ACB84753.1
PFAM: cobalamin B12-binding domain protein; D-Lysine 56-aminomutase alpha subunit; KEGG: tex:Teth514_1481 cobalamin B12-binding domain protein.
 
     0.948
ACB84754.1
KEGG: aoe:Clos_1694 putative component of D-ornithine aminomutase.
 
     0.928
ACB84787.1
PFAM: alanine racemase domain protein; KEGG: cbf:CLI_2040 alanine racemase, N-terminal domain protein.
 
     0.771
ACB85721.1
KEGG: ctc:CTC02567 glutamate mutase, MutL.
 
     0.724
ACB83769.1
KEGG: chy:CHY_2339 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein.
  
 
 0.666
ACB84678.1
PFAM: SirA family protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: amt:Amet_3499 sulfite reductase (ferredoxin); Belongs to the sulfur carrier protein TusA family.
  
  
 0.560
ACB84743.1
Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; Aluminium resistance family protein; KEGG: cko:CKO_04984 hypothetical protein.
  
 
 0.524
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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