STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84777.1KEGG: tpd:Teth39_1136 protein of unknown function DUF1432. (345 aa)    
Predicted Functional Partners:
ACB84776.1
PFAM: peptidase S14 ClpP; protein of unknown function DUF107; KEGG: bha:BH1356 hypothetical protein.
 
    0.981
ACB85316.1
PFAM: protein of unknown function DUF107; KEGG: afu:AF1781 nodulation protein NfeD (NfeD).
 
    0.763
ACB84778.1
Hypothetical protein; KEGG: dre:321113 zgc:65851.
       0.620
ACB84775.1
KEGG: hmo:HM1_2443 GatB/YqeY domain protein.
       0.567
rpsU
PFAM: ribosomal protein S21; KEGG: cbe:Cbei_2674 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.540
ACB84779.1
TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: drm:Dred_2486 protein of unknown function DUF1429.
       0.482
ACB84780.1
TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD; KEGG: amt:Amet_3034 putative stage IV sporulation YqfD.
       0.472
ACB84781.1
PFAM: PhoH family protein; KEGG: tte:TTE0970 phosphate starvation-inducible protein PhoH, predicted ATPase.
       0.455
ACB84782.1
Metal dependent phosphohydrolase; KEGG: pth:PTH_0891 predicted membrane-associated HD superfamily hydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase 7TM extracellular region; SMART: metal-dependent phosphohydrolase HD region.
       0.450
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.450
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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