STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84895.1TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: drm:Dred_0688 PRC-barrel domain protein. (91 aa)    
Predicted Functional Partners:
ACB84894.1
RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.893
ACB84893.1
RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.881
ACB86416.1
Hypothetical protein; KEGG: cdf:CD3564 stage II sporulation protein.
 
     0.815
ACB85233.1
TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: tpd:Teth39_1124 SpoVA protein.
  
    0.798
ACB85199.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
     0.773
ACB85232.1
TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; KEGG: aoe:Clos_1790 stage V sporulation AD family protein.
  
    0.772
ACB83671.1
TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; KEGG: oih:OB0068 hypothetical protein.
  
     0.771
ACB85284.1
TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD; KEGG: hmo:HM1_0277 stage III sporulation protein ad, putative.
  
     0.771
ACB85044.1
ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; KEGG: mta:Moth_1071 peptidase S14, ClpP.
 
     0.770
ACB84892.1
PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: mta:Moth_0851 peptidase U4, sporulation factor SpoIIGA.
 
     0.767
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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