STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84909.1TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: drm:Dred_1692 ATPase, P-type (transporting), HAD superfamily, subfamily IC. (879 aa)    
Predicted Functional Partners:
ACB83740.1
MgtC/SapB transporter; PFAM: amino acid-binding ACT domain protein; MgtC/SapB transporter; KEGG: amt:Amet_3081 MgtC/SapB transporter.
  
 
 0.639
ACB84908.1
PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: tpd:Teth39_1330 fibronectin-binding A domain protein.
   
   0.629
ACB84910.1
PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: cno:NT01CX_2251 hypothetical protein.
       0.618
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 
 0.539
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
 
      0.527
ACB85497.1
PFAM: Ankyrin; KEGG: fps:FP2172 hypothetical protein.
  
 
 0.520
ACB84920.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.495
ACB84911.1
PFAM: protein of unknown function DUF370; KEGG: ckl:CKL_1364 hypothetical protein; Belongs to the RemA family.
       0.480
ACB84914.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
  
 
 0.471
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
     
 0.457
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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