STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85150.1KEGG: tte:TTE0666 acetyltransferase (the isoleucine patch superfamily). (212 aa)    
Predicted Functional Partners:
ACB86082.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bca:BCE_5394 aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.854
ACB86084.1
PFAM: sugar transferase; KEGG: cth:Cthe_2344 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.842
ACB85151.1
KEGG: amt:Amet_3428 hypothetical protein.
       0.773
ACB85153.1
PFAM: glycosyl transferase family 2; KEGG: cac:CAC2175 glycosyltransferase.
  
  
 0.627
ACB86060.1
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dsy:DSY3347 hypothetical protein.
 
  
 0.627
ACB85149.1
Conserved hypothetical protein; KEGG: ccv:CCV52592_0405 ribonuclease HII (RNase HII).
       0.618
ACB85152.1
KEGG: amt:Amet_3446 hypothetical protein.
       0.578
ACB85154.1
KEGG: bay:RBAM_037570 hypothetical protein.
       0.525
ACB85148.1
TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: gka:GK3296 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.523
ACB84001.1
PFAM: glycosyl transferase group 1; KEGG: tte:TTE0949 predicted glycosyltransferase.
 
  
 0.517
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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