STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85222.1Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tex:Teth514_1575 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (387 aa)    
Predicted Functional Partners:
ACB85238.1
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: aoe:Clos_1588 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.931
ACB84795.1
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cth:Cthe_0272 serine-type D-Ala-D-Ala carboxypeptidase.
 
  
 
0.924
ACB83651.1
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tte:TTE0925 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.913
ACB85600.1
PFAM: glycosyl transferase family 51; KEGG: chy:CHY_1635 penicillin-binding protein, 1A family.
   
 
 0.906
ACB85636.1
Penicillin-binding protein, 1A family; KEGG: pth:PTH_1935 membrane carboxypeptidase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
   
 
 0.906
ACB85384.1
Penicillin-binding protein, 1A family; KEGG: pth:PTH_1935 membrane carboxypeptidase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein.
     
 0.905
ACB85221.1
PFAM: nucleoside recognition domain protein; KEGG: mta:Moth_1356 nucleoside recognition.
  
  
 0.843
ACB85220.1
PFAM: nucleoside recognition domain protein; KEGG: gka:GK2284 spore maturation protein.
  
  
 0.823
ACB85444.1
KEGG: tte:TTE2703 putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation).
 
      0.810
ACB84881.1
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: oih:OB1465 stage V sporulation protein D.
 
 0.720
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.