STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85305.1PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mta:Moth_1554 type II secretion system protein E. (561 aa)    
Predicted Functional Partners:
ACB85304.1
PFAM: type II secretion system protein; KEGG: csc:Csac_1062 type II secretion system protein.
 
 0.986
ACB85668.1
PFAM: type II secretion system protein; KEGG: chy:CHY_0632 type IV pilus assembly protein PilC.
 
 0.942
ACB85300.1
KEGG: ppd:Ppro_0992 type IV pilus assembly protein PilM.
 
 
 0.873
ACB85657.1
PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: oih:OB0617 leader peptide processing enzyme.
 
 
 0.865
ACB85302.1
Hypothetical protein; KEGG: chy:CHY_0637 prepilin peptidase domain protein.
  
 
 0.836
ACB85667.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: ade:Adeh_0641 type IV pilus assembly protein PilM.
 
 
 0.801
ACB85825.1
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: oih:OB2517 late competence protein required for DNA uptake.
   
  
 0.688
ACB85301.1
Hypothetical protein.
       0.682
ACB85303.1
Hypothetical protein; KEGG: rxy:Rxyl_1161 prepilin-type cleavage/methylation-like protein.
       0.682
ACB85687.1
PFAM: beta-lactamase domain protein; copper amine oxidase domain protein; KEGG: hha:Hhal_1314 beta-lactamase domain protein.
  
  
 0.671
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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