STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85476.1Beta-lysine 5,6-aminomutase beta subunit, D-lysine 5,6-aminomutase beta subunit; PFAM: cobalamin B12-binding domain protein; KEGG: aoe:Clos_0422 cobalamin B12-binding domain protein. (246 aa)    
Predicted Functional Partners:
ACB85477.1
PFAM: D-Lysine 56-aminomutase alpha subunit; KEGG: amt:Amet_4549 D-lysine 5,6-aminomutase alpha subunit.
 
 0.999
ACB85473.1
KEGG: pgi:PG1069 alcohol dehydrogenase, zinc-containing, putative.
 
  
  0.987
ACB85455.1
KEGG: pgi:PG1069 alcohol dehydrogenase, zinc-containing, putative.
 
  
  0.978
ACB84749.1
PFAM: dihydrodipicolinate reductase; KEGG: tpd:Teth39_1040 dihydrodipicolinate reductase.
 
  
  0.934
ACB85478.1
KEGG: tte:TTE0724 hypothetical protein.
 
     0.932
ACB85457.1
KEGG: aoe:Clos_0418 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein.
    
  0.906
ACB86433.1
KEGG: aoe:Clos_0418 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein.
    
  0.906
ACB84225.1
PFAM: aminotransferase class IV; KEGG: noc:Noc_2631 D-alanine transaminase.
     
 0.904
ACB85474.1
3-keto-5-aminohexanoate cleavage enzyme; PFAM: protein of unknown function DUF849; KEGG: fno:Fnod_0209 protein of unknown function DUF849.
 
     0.811
ACB85454.1
3-aminobutyryl-CoA ammonia-lyase; PFAM: thioesterase superfamily protein; KEGG: fno:Fnod_0210 acyl-CoA hydrolase.
 
     0.780
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.